mahsa106's repositories
22_6xx-DG-for-PDEs
An intro to DG methods for PDEs
bg-atlasapi
A lightweight python module to interact with atlases for systems neuroscience
BrainJ
Fiji pipeline for automated serial section reconstruction and mouse brain analysis.
brainrender
a python based software for visualization of neuroanatomical and morphological data.
ClearMap2
ClearMap 2.0 with WobblyStitcher, TubeMap and CellMap
graphnics
Data structures and models for solving flow equations on networks
morphapi
Apis to download neuronal morphologies from publicly available datasets
SimVascular
A comprehensive opensource software package providing a complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.
vessap
Experimental code and examples for: Automated analysis of whole brain vasculature using machine learning
Zotero-Dark-Theme
userChrome.css file for a Zotero dark theme. Suggestions for improvements are welcome.