m5imunovic's repositories
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GNNome-assembly
Learning to untangle genome assembly with graph neural networks.
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rust-mdbg
minimizer-space de Bruijn graphs (mdBG) for whole genome assembly
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hifi-simulator
A simulator for PacBio HiFi reads
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GFAConverter
Simple converter of GFA into more portable formats
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ntHash
Fast hash function for DNA sequences
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py3nvml
Python 3 Bindings for NVML library. Get NVIDIA GPU status inside your program.
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awesome-selfhosted
A list of Free Software network services and web applications which can be hosted on your own servers
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vscode-makefile-tools
MAKE integration in Visual Studio Code
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syzkaller
syzkaller is an unsupervised coverage-guided kernel fuzzer
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NeuralLayout
A GNN model that executes simplification algorithms used in the layout phase of de novo genome assembly process.
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math
Notes for various math topics
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Misc
Miscellaneous code files
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scikit-learn
scikit-learn: machine learning in Python
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