luntergroup / octopus

Bayesian haplotype-based mutation calling

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How to install forest model with conda installed version?

yangyxt opened this issue · comments

commented

Describe the bug
A clear and concise description of what the bug is.
I would like to install the forest model with the conda installed octopus. However, from ur documentation I see that I must access the install.py script inside ur github repo first to do that. I wonder whether there is a way to install via the octopus binary file from conda.
Version
0.7.4.0

$ octopus --version
// PASTE OUTPUT HERE

Command
Command line to install octopus:

$ 

Command line to run octopus:

$ octopus

Additional context
Add any other context about the problem here, e.g.

  • Reference [e.g. hg19]. Please provide link to fasta if atypical.
  • BAM files (if possible).

You can't install forest models they seem totally unavailable on the Google cloud. Looks like a payment problem