Typo?
CiaoHe opened this issue · comments
Hi Phil and Eric @hypnopump
I'm not familiar with the operations on protein structure or whatever :(, but here I wonder is it a mistake when indexing:
alphafold2/alphafold2_pytorch/utils.py
Line 702 in 5214156
Perhaps it should be new_coords[s,:-padding or None, i] since in the inner loop it just constructs the s-th sequence sidechain's coords.
Best,
Oh yes! Hidden bug (the function was only used with one sequence so the error ran unnoticed).
In general, the utils need an update (which i do have locally but havent pushed). I'll be updating them in the following days.
Oh yes! Hidden bug (the function was only used with one sequence so the error ran unnoticed).
In general, the utils need an update (which i do have locally but havent pushed). I'll be updating them in the following days.
Thanks a lot eric!
