lsj2408 / Transformer-M

[ICLR 2023] One Transformer Can Understand Both 2D & 3D Molecular Data (official implementation)

Home Page:https://arxiv.org/abs/2210.01765

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OSError: /home/miniconda3/envs/Transformer-M/lib/python3.7/site-packages/torch_sparse/_convert_cuda.so: undefined symbol: _ZNSt15__exception_ptr13exception_ptr9_M_addrefEv

Saoge123 opened this issue · comments

Hi:
Thanks for sharing the code of your cool work.
The code is OK when I run the train.py in terminal of ubuntu 22.04. However, when I debug the code by VScode, an error occurred: OSError: /home/xx/miniconda3/envs/Transformer-M/lib/python3.7/site-packages/torch_sparse/_convert_cuda.so: undefined symbol: _ZNSt15__exception_ptr13exception_ptr9_M_addrefEv.

/home/xx/miniconda3/envs/Transformer-M/lib/python3.7/site-packages/torch_sparse/_convert_cuda.so: undefined symbol: _ZNSt15__exception_ptr13exception_ptr9_M_addrefEv
File "/home/xx/Transformer-M-main/Transformer-M/data/dataset.py", line 3, in
from ogb.lsc import PCQM4Mv2Evaluator
File "/home/xx/Transformer-M-main/Transformer-M/tasks/graph_prediction.py", line 37, in
from ..data.dataset import (
File "/home/xx/Transformer-M-main/fairseq/tasks/init.py", line 119, in import_tasks
importlib.import_module(namespace + "." + task_name)
File "/home/xx/Transformer-M-main/fairseq/utils.py", line 511, in import_user_module
import_tasks(tasks_path, f"{module_name}.tasks")
File "/home/xx/Transformer-M-main/fairseq/options.py", line 237, in get_parser
utils.import_user_module(usr_args)
File "/home/xx/Transformer-M-main/fairseq/options.py", line 38, in get_training_parser
parser = get_parser("Trainer", default_task)
File "/home/xx/Transformer-M-main/fairseq_cli/train.py", line 493, in cli_main
parser = options.get_training_parser()
File "/home/xx/Transformer-M-main/train.py", line 14, in
cli_main()
OSError: /home/xx/miniconda3/envs/Transformer-M/lib/python3.7/site-packages/torch_sparse/_convert_cuda.so: undefined symbol: _ZNSt15__exception_ptr13exception_ptr9_M_addrefEv