Annotated peak files have data mixed with header
lparsons opened this issue · comments
The ChIPSeeker annotatePeak function is not properly reading the broadpeak files which have no header. Thus, the first peaks data is getting mixed in with the headers. Adding a header line seems to address this before running annotatePeak.
chr>start> end>name> score> strand> fold_enrichment>-log10(pvalue)> -log10(qvalue)