lollows's repositories
PSFmodels-py
Python bindings for scalar and vectorial models of the 3D microscope point spread function.
3DMembraneReconstruction
The is a package to reconstruct 3D membrane fluorescent/brightfield microscope images/movies.
assignment2
first commit
cmake_gpufit
A camke project using gpufit dll
copytoImagePlus
Assuming you have communication between ImageJ and MATLAB via ImageJ-MATLAB, copytoImagePlus allows you to turn a MATLAB array into ImagePlus object.
cs231n.github.io
Public facing notes page
DALI
A library containing both highly optimized building blocks and an execution engine for data pre-processing in deep learning applications
ddff-pytorch
Deep Depth from Focus implementation
ddff-toolbox
Toolbox for Deep Depth From Focus
DSMO.course
Data Science and Matrix Optimization course
fairSIM
Free Analysis and Interactive Reconstruction for Structured Illumination Microscopy
LSGANs
Implementation of Least Squares Generative Adversarial Networks (GAN); can generate stably high quality image with Pytorch
Machine-learning-for-image-based-wavefront-sensing
Master thesis: Uliège
MicroscPSF-Matlab
Fast and Accurate 3D PSF Computation for Fluorescence Microscopy
MicroscPSF-Py
Fast and Accurate 3D PSF Computation for Fluorescence Microscopy
ml-pyxis
Tool for reading and writing datasets of tensors in a Lightning Memory-Mapped Database (LMDB). Designed to manage machine learning datasets with fast reading speeds.
Multi-Sensor-DiffuserCam
The Multi-Sensor DiffuserCam project explores diffuser-based imaging systems with multiple sensors. This repository contains MATLAB scripts that interface with Zemax OpticStudio (here we are using version 17.5) allowing users to run analyses available in the OpticStudio suite on a lens file of their choice.
newSIM
SIMcheck and fairSIM...
pytorch
Tensors and Dynamic neural networks in Python with strong GPU acceleration
read_metrology_formats
Functions to read metrology surface in common instrument formats
SIM4codes
A frequency domain SIM reconstruction algorithm using reduced number of images
SIMcheck
SIMcheck: ImageJ tools for assessing Structured Illumination Microscopy (SIM) data quality and reliability
SIMcheck-fairSIM
Integrate the SIM software
TeeChart-VCL-for-VCL-Delphi-CBuilder--applications-samples
Sample programs showing how to use TeeChart VCL for Delphi and C++ Builder
variational-depth-from-focus
Implementation of "Variational Depth from Focus Reconstruction" [Moeller 2015]
yolov3
YOLOv3 in PyTorch > ONNX > CoreML > iOS