lh3 / seqtk

Toolkit for processing sequences in FASTA/Q formats

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converting fasta to fastq

keecarter opened this issue · comments

I am attempting to convert my fasta files to fastq using the command:
seq -F contig.2.fasta > contig.2.fq

but I keep getting:
seq: invalid option -- F

seq: invalid option -- F

This is the seq command from the system.

The right way is

seqtk seq -F G      contig.2.fasta > contig.2.fq

So I am getting an fq file, but it is empty.