Leila Elabbady's repositories
Perisomatic_Based_CellTyping
Repository to accompany the manuscript Perisomatic Features Enable Efficient and Dataset Wide Cell-Type Classifications Across Large-Scale Electron Microscopy Volumes (Elabbady 2022).
Cell_size_to_synapses
Scripts to plot and analyze variations in size and connectivity for a given set of cells
interneuron-project
Information for the MICrONS interneuron project
gunpowder
A library to facilitate machine learning on multi-dimensional images.
daisy
Block-wise task scheduling for large nD volumes.
synister
Neurotransmitter prediction from EM.
CitePaL
Cited Paper Locater is a tool to help researchers surface commonly cited articles related to any paper found on semantic scholar.
Influential_References
An interactive visualization of scholarly references to help guide users to find influential and relevant papers
literature_search
An altair web app to search for foundational papers over time from semantic scholar metadata.
future_of_scholarly_publishing
Compilation of work for UW CSE 599
EMAnnotationSchemas
Repository to hold schemas for annotations of volumetric imaging data focused on EM
MicronsBinder
A collection of notebooks to provide examples of using Microns-explorer.org datasets
neuroglancer
WebGL-based viewer for volumetric data