Lee Newberg's repositories
ALBench
Benchmarking tool for evaluating Active Learning strategies for machine learning
batchbald_redux
Reusable BatchBALD implementation
ExtensionsIndex
Slicer extensions index
HistomicsDetect
A package for cell detection models using TensorFlow
HistomicsML2
A tool for training machine-learning models with whole-slide imaging datasets
HistomicsStream
A whole-slide image reader for TensorFlow
HistomicsTK
A Python toolkit for pathology image analysis algorithms.
HistomicsUI
A Girder plugin for pathology image annotations and analysis.
ITK
Insight Toolkit (ITK) -- Official Repository
ITKColorNormalization
Structure preserving color normalization on H&E images using a reference image
ITKExamples
Cookbook examples for the Insight Toolkit documented with Sphinx
ITKModuleTemplate
A template to start an ITK Module
ITKPythonPackage
A setup script to generate ITK Python Wheels
ITKPyTorch
Implementations of ITK spatially-aware filters in PyTorch
ITKRemoteModuleBuildTestPackageAction
A composite GitHub Action to build, test, and package, ITK remote modules
ITKSoftwareGuide
Sources for the ITKSoftwareGuide.
ITKUltrasound
ITK module with classes particularly useful for ultrasound.
ITKVkFFTBackend
VkFFT backends for ITK FFT classes.
lungair-desktop-application
Desktop application for AI-based BPD risk analysis
MONAI
AI Toolkit for Healthcare Imaging
monai-deploy-app-sdk
MONAI Deploy App SDK offers a framework and associated tools to design, develop and verify AI-driven applications in the healthcare imaging domain.
probability
Probabilistic reasoning and statistical analysis in TensorFlow
SlicerSurfaceToolbox
Supports various cleanup and optimization processes on surface models
superpixel-classification
A test cli for classifying superpixels with arbitrary labels
VkFFT
Vulkan/CUDA/HIP/OpenCL Fast Fourier Transform library
vpaw
A surgical planning software system targeted to pediatric patients with airway obstruction.