lcolladotor / derfinder

Annotation-agnostic differential expression analysis of RNA-seq data via expressed regions-level or single base-level approaches

Home Page:http://lcolladotor.github.io/derfinder

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error in calculatePvalues() when fstats.output appears to be a list

lcolladotor opened this issue · comments

2013-12-11 07:38:25 calculatePvalues: calculating F-statistics for permutation 309
Error in unlist(RleList(fstats.output), use.names = FALSE) :
  error in evaluating the argument 'x' in selecting a method for function 'unlist': Error in .Call2("Rle_constructor", values, lengths, check, 0L, PACKAGE = "IRanges") :
  Rle of type 'list' is not supported
Calls: RleList ... Rle -> .local -> Rle -> Rle -> .local -> .Call2 -> .Call
Calls: analyzeChr -> calculatePvalues -> unlist
Execution halted

Could be related to #9

Haven't reproduced this problem in a while. Without further leads, we'll drop this issue.