Cy's repositories
16s_workflow-1
16s pipelines based on luigi with qiime2-dada2/ qiime2-deblur/vsearch/usearch
Language:PythonGPL-3.0000
bacannot
Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
Language:NextflowGPL-3.0000
droplet_video_analyzer
A python program to implement the video analysis techniques described in the paper "Low-cost measurement of facemask efficacy for filtering expelled droplets during speech" by Emma P. Fischer, Martin C. Fischer, David Grass et al, of Duke University.
Language:PythonNOASSERTION000
genomes-pipeline
MGnify genome analysis pipeline
Language:PythonNOASSERTION000
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mag
Assembly and binning of metagenomes
Language:NextflowMIT000
quick-portfolio
Use this template if you need a quick developer / data science portfolio! Based on a Minimal Jekyll theme for GitHub Pages.
Language:HTMLUnlicense000