Aaron Darling's repositories
graphdeconvolution
deconvolution of species & strain genome mixtures in assembly graphs
proxigenomics
Hi-C analysis of heterogeneous samples
docker-A5-miseq
a docker container for benchmarking A5-miseq in nucleotid.es
mauveAligner
command-line interface software for genome alignment
platypusfarm
lab website, software, tutorials, and related material
angus
Materials for Analyzing Next-Generation Sequencing (ANGUS) course.
assembler-list
List of assemblers to be evaluated.
bananasmoothie
Data and analysis scripts from the KFED microbiome
cqf
A General-Purpose Counting Filter: Counting Quotient Filter
meta3Ctools
tools for QC and assembly of metagenomic 3C data
primalscheme
a tool for designing primer panels for multiplex PCR.
repeatoire
constructs local multiple alignments of repeat families
TheEvilAnalysis
repository for reanalysis of milk microbiome data