klarman-cell-observatory / Perturb-CITE-seq

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Truncated sgRNA lists in all_sgRNA_assignments.txt

yewero opened this issue · comments

In the all_sgRNA_assignments.txt file, the sgRNA lists for 42 cells were truncated into strings with 100 characters.
For example:

CELL_8086,"CXCR4_1,EEA1_3,FSTL3_2,HLA-A_1,HLA-E_3,HLA-F_1,IDI2-AS1_1,LGALS3_3,NOLC1_2,PROS1_3,SERPINA3_2,SLC5A3"
CELL_9871,"ATP1B1_2,C6orf226_3,CMSS1_3,DDR1_1,FBXO32_2,FMN1_3,FSTL3_2,MDH2_1,NPC2_1,RAB27A_2,RB1_2,SLC26A2_1,ON"
CELL_10049,"C6orf226_1,CHCHD2_2,CYP27A1_2,LGALS3BP_2,SMAD4_3,TRIM22_1,ONE_NON-GENE_SITE_869,NO_SITE_172,NO_SITE_"

How could I get the full list? Thanks

This has been corrected and uploaded to the Broad Single Cell portal