kirichoi

evoMEG

evoMEG: evolutionary algorithm-based Model Ensemble Generation

CCR

evoMEG: evolutionary algorithm-based Model Ensemble Generation

DrosophilaOlfaction

netplotlib

A simple package for visualizing and analyzing reaction network models

antimony-automata

Conway's Game of Life in Antimony

CCLE-ssGSEA

centos-devtools

metaMEG

metaMEG: metabolic pathway Model Ensemble Generation

dockcross

Cross compiling toolchains in Docker images

DrosophilaPerception

FqClustering

kirichoi.github.io

libSBML-dependencies

Set of dependencies for compiling libSBML

libSBOL

C++ implementation of libSBOL 2.0.0.

moonwalk

A fast & minimal Jekyll blog theme with clean dark mode

NSSR

Network Search Space Reduction Algorithm

PolymerConnectome

pySME

Python script to run R SME package

raptor

Redland Raptor RDF syntax library

roadrunner

libRoadRunner: A high-performance SBML simulator

seaborn

Statistical data visualization using matplotlib

simplesbml

Python package for building SBML models without needing to use libSBML.

spyder-opensbml

openSBML plugin for Spyder 3.0+

spyder-ratelaw

Tellurium RateLaw plugin for Spyder 3.0+

spyder-teimport

Tellurium Import plugin for Spyder 3.0+

spyderplugins

Plugins for Spyder IDE

tellurium

IDE to model and simulate biochemical & synthetic biology systems

telPlugins

Plugins for Telluirum

tensorflow

Computation using data flow graphs for scalable machine learning

word_cloud

A little word cloud generator in Python