Fabian Kilpert's repositories
bioconda-recipes
Conda recipes for the bioconda channel.
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data_repository
Makefiles and all associated scripts needed to completely remake /data/repository on all linux desktops
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dna-seq-gatk-variant-calling
This Snakemake pipeline implements the GATK best-practices workflow
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dna-seq-varlociraptor
Variant detection with Delly and Freebayes, followed by statistical assessment with Varlociraptor
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ont_tools
Snakemake workflow for comprehensive ONT analysis
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rna-seq-star-deseq2
RNA-seq workflow using STAR and DESeq2
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snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
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training-material
A collection of training material from offered Galaxy courses