kevinpetersavage

bambytereader

biodata

Java library that models biological entities and their equivalents in different file formats typically used in bioinformatics

BOUT-dev

Development (unstable) branch of BOUT++

cellbase

High-Performance NoSQL database and RESTful web services to access to most relevant biological data

Comprehend

Initial attempt at list comprehensions in java

faff

fiducials

fourcolour

gel2decipher

Prototype to send variants from Genomics England to Decipher API

htsjdk

A Java API for high-throughput sequencing data (HTS) formats.

imod-docker

docker image for imod

ispyb-api

Server-side Python API for ISPyB, mainly intended for storing processin results

leaky-houses

leaky-shovel

mmtf-spark

Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.

mmtf-workshop-2017

Structural Bioinformatics Training Workshop & Hackathon 2017

mrcfile

A Python implementation of the MRC2014 file format

notebooks

Testing out github notebooks

nullobjectsjava

nullobjectspython

opencga

An Open Computational Genomics Analysis platform for big data processing and analysis in genomics

othello

palindrome

pyark

A Python client to query CVA

richbeans

Richbeans Project

scipion

Scipion is an image processing framework to obtain 3D models of macromolecular complexes using Electron Microscopy (3DEM)

snake

Model of a rubics snake

spark-annotator

POC

stomp.py

“stomp.py” is a Python client library for accessing messaging servers (such as Apollo or RabbitMQ) using the STOMP protocol (versions 1.0, 1.1 and 1.2). It can also be run as a standalone, command-line client for testing.

washingmacine