KBoehme / ADGC_HRC_merge

ADGC HRC Imputed Data Merge.

ADGC HRC Imputed Data Merge

To Use:

1. Download Repo
2. Download conda/miniconda, and install snakemake.
3. Install all program dependencies and ensure they are on the PATH.
4. Run a dry run with something like (remove -np for real run):

snakemake -np --verbose -j 999 --cluster-config ../scripts/cluster.json -s ../scripts/Snakefile --cluster \
"sbatch \
--ntasks {cluster.ntasks} \
--time {cluster.time} \
--mem {cluster.mem} \
--job-name {cluster.name} \
--mail-type {cluster.mail-type} \
--mail-user {cluster.mail-user} \
--parsable" \
--cluster-status ../scripts/slurm_status.py