kate-crosby

pedigree

maize pedigrees

posterMGC

posterMGC

sfsGBS

SFS with GBS data

altitude_moisture

quick grab of rasters and comparison of SA and Mex

blups_R

chone

repo for chone misc

circleplot

Tools for exploring distance matrices using circular plots.

cv

Repo for working CV.

datatable_slides

slides for datatable and stringr

elasticnet

Elastic nets, lasso, ridge, examples, etc.

expanding_polyps

Repo for polyploid expansion wave idea

GDB-sim

A shiny application that simulates plant disease spread on a 25x25 grid

GRaF_paper

Repo containing GRaF - scripts, some data.

historical_genomics_MS

MS historical genomics

phasing

Repo for phasing and imputation

phasing_tests

PolygenicAdaptationScript

ProgenyArray

An R package to work with half-sib progeny array data

quant_genR_tucson

Repo for quantitative gen for Tucson Plant Breeding Institute

reproductive_economy_in_oats

Little R simulation I wrote for paper back in 2012 when all I could do was "for" loops.

s_lattice

HMM-based estimator for selection coefficients in both single and lattice populations

SeeDs

Ideas for SeeDs data

simulation_epistasis

Rough R script for drift simulation two trait, four locus population change

spopmodel

DFG sturgeon

SweeD

positive selection scans maize post 80s

wrangling-genomics

Lesson for wrangling genomics data