Kameron Decker Harris's repositories
allen-voxel-network
Data processing pipeline for Allen Institute for Brain Science voxel connectivity data
max-qnorm-tensor-completion
Tensor completion via max-quasinorm minimization
L-BFGS-B-C
L-BFGS-B, converted from Fortran to C, with Matlab wrapper
sparse-random-features
Sparse random features inspired by sparse networks in the brain (e.g. cerebellum, mushroom body, electrosensory lateral line)
spatial-network-regression
Voxel connectome inference via nonnegative spline regression
chunk-pbs
Break a list of commands into chunks to be executed as separate PBS (Portable Batch System) jobs
prebotc-graph-model
Bursting neuron model of the pre-Botzinger complex, implementing multiple neuron types and arbitrary network structure
friday-harbor
Starter code for the 2014 Dynamic Brain Workshop in Friday Harbor
high-res-connectivity-nips-2016
Code and data repository to accompany "High resolution neural connectivity from incomplete tracing data using nonnegative spline regression"
kamdh.github.io
My website
mouse_connectivity_models
Python package providing mesoscale connectivity models for mouse.
ssm
Bayesian learning and inference for state space models