jvkersch

pyconcorde

Python wrapper around the Concorde TSP solver

tmtools

Python bindings for the TM-align algorithm and code for protein structure comparison developed by Zhang et al.

arxiv2obsidian

An Obsidian plugin to import arXiv metadata

minio-rabbitmq-notifications

nmssearch

Fast exact similarity search for genomic sequences, using NMSLIB

notebooks

aoc2022

blog

book-reviews

(Some) books that I've read, along with reviews

chaco

Chaco is a Python package for building interactive and custom 2-D plots.

chopper

crypt4gh

GA4GH cryptographic tools

dotfiles

drs-filer

Lightweight, flexible Flask/Gunicorn-based GA4GH DRS implementation

dupfind

feedback-integrators

ISM

Course notes for "Introduction to Statistical Modeling"

jvkersch.github.io

Metal.jl

Metal programming in Julia

mini-ViT

nmslib

Non-Metric Space Library (NMSLIB): An efficient similarity search library and a toolkit for evaluation of k-NN methods for generic non-metric spaces.

OSCalculusandAnalysis

This repository contains the source code for the OS Calculus and Analysis

parameter-estimation

parasail-python

Python bindings for the parasail C library.

presentations

pyconcorde-build

Automated builds of the Concorde TSP solver

snippets

All sorts of weird stuff

statistics-apps

Shiny apps to support the course on Probability and Statistics at GUGC, South Korea

statistics-playground

sympnets