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josiahseaman / skittle

DNASkittle is a web based genome browser that provides an interactive visualization of the raw sequence. Every nucleotide of 10Kbp can fit on one screen at a time. It makes heavy use of signal processing techniques to extract tandem repeats, and other genome elements.

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Oligomer Usage normalization needs to be static

josiahseaman opened this issue · comments

commented

Experimentally determine the normalization values based on many chunks. Turn that into an equation with width as an experimental variable and use that for normalization in the code.