Joao Ponte's repositories
connected-components-3d
Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants.
cross-section
Tools for computing properties of cross sections of 3D voxelized images.
dijkstra3d
Dijkstra's Shortest Path for 6, 18, and 26-Connected 3D (Volumetric) Image Volumes
euchar
Compute Euler Characteristic curves and surfaces of image and point data.
euclidean-distance-transform-3d
Euclidean distance & signed distance transform for multi-label 3D anisotropic images using marching parabolas.
fast-neural-style-pytorch
Fast Neural Style Transfer implementation in PyTorch :art: :art: :art:
fastmorph
Multilabel and Grey 3D morphological image processing functions. Dilate, Erode, Opening, Closing.
Force-2020-Machine-Learning-competition
the results, code and the data for the Force 2020 Machine learning competition after the completion of the competition in October 2020.
G2S
A flexible MPS framework
geoscience-ML-tutorial
Some simple tutorials about machine learning / deep learning / optimization in geosciences.
Image-Super-Resolution-via-Iterative-Refinement
Unofficial implementation of Image Super-Resolution via Iterative Refinement by Pytorch
joaoponte-page
My personal web page ;)
medical-to-micro-CT
Repository with part of the code used on the paper "Generation of μCT images from medical CT scans of carbonate rocks using a diffusion-based model"
neupy
NeuPy is a Tensorflow based python library for prototyping and building neural networks
style-transfer-downscaling-paper
ST method applied to CT images
fastremap
Remap, mask, renumber, unique, and in-place transposition of 3D labeled images. Point cloud too.
fill_voids
Fill holes in binary 2D & 3D images fast.
kimimaro
Skeletonize densely labeled 3D image segmentations with TEASAR. (Medial Axis Transform)
Literatura-Alema
Circulação de literatura ficcional em língua alemã no Brasil do século XIX
neuroglancer
WebGL-based viewer for volumetric data
python-bootcamp-for-geoengineers
Python source codes and notebooks from my courses I've given to SPEs and in Marietta College, Ohio, US
pytorch_multi_input_example
Multi-Input Deep Neural Networks with PyTorch-Lightning - Combine Image and Tabular Data
SimpleElastix
Multi-lingual medical image registration library
SimpleEQ
The code for the SimpleEQ C++ Plugin Project featured on FreeCodeCamp YT channel
somoclu
Massively parallel self-organizing maps: accelerate training on multicore CPUs, GPUs, and clusters