JiaShun Xiao (JiaShun-Xiao)

JiaShun-Xiao

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Location:HKUST

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JiaShun Xiao's repositories

BLAST-bioinfor-tool

Python implementation of Basic Local Alignment Search Tool (BLAST) , which is the core algorithm in sequence alignment for genomes.

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face-alignment-ert-2D

implement of "One millisecond face alignment with an ensemble of regression tree" in python

BWT-sequencing-reads-align

Python implementation of Burrows-Wheeler Transform and the Alignment process

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Rethinking-Generalization-of-DL

implement of "Understanding deep learning requires rethinking generalization"

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Fine-tuned-FaceNet

Fine-tuned FaceNet model

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manhattan_generator

Manhattan plot Generator

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SparseLMM

the implementation of “varbvs: Fast Variable Selection for Large-scale Regression” in python

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SpatialScope-tutorial

A unified approach for integrating spatial and single-cell transcriptomics data by leveraging deep generative models

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squidpy

Spatial Single Cell Analysis in Python

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Tophat-discovering-splice-junctions

Python implementation of Tophat algorithms that discovering splice junctions with RNA-Seq

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tredparse

TREDPARSE: HLI Short Tandem Repeat (STR) caller

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VCM

R package VCM contains three approaches for solving variance components model: PX-EM algorithm, MM algorithm and Method of Moments

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YSF

YSF - 国家自然科学基金青年项目LaTeX模版

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