Jennifer Müller's repositories
bacass
Simple bacterial assembly and annotation pipeline
BLASTphylo_online_appendix
Further Tables and Figures
Doktorarbeit_Laura_Luib
Online Appendix für die Doktorarbeit von Laura Luib
FASTAptameR-2.0
This repository holds the FASTAptameR 2.0 code and related resources.
live-nano
A shiny GUI for real-time species identification from Nanopore data
masterthesis_Lea_Friedrich
Analysis data for the master's thesis of Lea Friedrich
modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
nf-co.re
Code and files for the main nf-core website.
nxf-bcl
A simple nextflow pipeline for Illumina run metrics (InterOp) and generation of fastq files (bcl2fastq)
plasmIDent
Fork of the plasmIDent pipeline
rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
tools
Python package with helper tools for the nf-core community.