jcchan23

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Sun Yat-sen University

GuangZhou GuangDong China

http://www.cnblogs.com/jcchan

Jianwen Chen's starred repositories

pytorch_VAE_CVAE

pytorch implementation Variational Autoencoder and Conditional Variational Autoencoder

Language:Jupyter Notebook7700

protein-vae

Variational autoencoder for protein sequences - add metal binding sites and generate sequences for novel topologies

Language:PythonMIT7900

DeepTCR

Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data

Language:Jupyter NotebookMIT11200

ERGO

ERGO is a deep learing based model for predicting TCR-peptide binding.

Language:PythonMIT1700

DenseNet

Densely Connected Convolutional Networks, In CVPR 2017 (Best Paper Award).

Language:LuaBSD-3-Clause470400

conv_arithmetic

A technical report on convolution arithmetic in the context of deep learning

Language:TeXMIT1391400

CVAE

github for "Molecular generative model based on conditional variational autoencoder for de novo molecular design"

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modlAMP

Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.

Language:PythonNOASSERTION5000

BullshitGenerator

Needs to generate some texts to test if my GUI rendering codes good or not. so I made this.

Language:JavaScriptNOASSERTION1569300

dgl

Python package built to ease deep learning on graph, on top of existing DL frameworks.

Language:PythonApache-2.01330000

PyTorch-BigGraph

Generate embeddings from large-scale graph-structured data.

Language:PythonNOASSERTION336200

UniRep

UniRep model, usage, and examples.

Language:Python33300

deepwalk

DeepWalk - Deep Learning for Graphs

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mcmc-demo

Interactive Markov-chain Monte Carlo Javascript demos

Language:JavaScriptMIT77000

hssp

Create DSSP and HSSP files

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chemprop

Message Passing Neural Networks for Molecule Property Prediction

Language:PythonNOASSERTION166000

camelot

A Python library to extract tabular data from PDFs

Language:PythonMIT287000

LabAC

搭建一个实验室网站 👏🐳 show your Lab achievement

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biopandas

Working with molecular structures in pandas DataFrames

Language:PythonBSD-3-Clause70300

xgboost

Scalable, Portable and Distributed Gradient Boosting (GBDT, GBRT or GBM) Library, for Python, R, Java, Scala, C++ and more. Runs on single machine, Hadoop, Spark, Dask, Flink and DataFlow

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pytorch_structure2vec

pytorch implementation of structure2vec (https://arxiv.org/abs/1603.05629)

Language:PythonMIT30300

SEAL-CI

A PyTorch implementation of "Semi-Supervised Graph Classification: A Hierarchical Graph Perspective" (WWW 2019)

Language:PythonGPL-3.020800

sql-server-samples

Azure Data SQL Samples - Official Microsoft GitHub Repository containing code samples for SQL Server, Azure SQL, Azure Synapse, and Azure SQL Edge

NOASSERTION985800

DGCNN

Code for "M. Zhang, Z. Cui, M. Neumann, and Y. Chen, An End-to-End Deep Learning Architecture for Graph Classification, AAAI-18".

Language:MatlabMIT16900

pytorch_DGCNN

PyTorch implementation of DGCNN

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tqdm

:zap: A Fast, Extensible Progress Bar for Python and CLI

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gplearn

Genetic Programming in Python, with a scikit-learn inspired API

Language:PythonBSD-3-Clause157800

cdhit

Automatically exported from code.google.com/p/cdhit

Language:PerlGPL-2.062900

Machine-learning-for-proteins

Listing of papers about machine learning for proteins.

GPL-3.0800

chembl_webresource_client

Official Python client for accessing ChEMBL API

Language:PythonNOASSERTION36300