Ka Long's repositories
vnet-tensorflow
Implementation of vnet in tensorflow for medical image segmentation
Medical-Image-Classifier
Neural network classifier for medical image using Tensorflow
Vessel-Clipper
Clip vessel surface with user input centerlines
Multiplanar-Reconstruction
A simple C++ software for curved multiplanar reconstruction.
HealthyPi-Python-Interface
A Python Interface for ProtoCentral HealthyPi v3
Vessel-Smoothing
A simple CLI tool to smooth vascular surface
Medical-Variational-Autoencoder
Medical image specialized Tensorflow implementation of VAE
RNN-Vessel-Classifier
Vascular model classifier using sequence embedded centerline
aicsimageio
Image Reading, Metadata Conversion, and Image Writing for Microscopy Images in Python
BioImageAnalysisNotebooks
Python Jupyter notebooks for BioImageAnalysis, GPU-accelerated image processing, bio-image data science and more
caffe-unet-docker
The U-Net Segmentation server (caffe_unet) for Docker
docker-example-omero
OMERO Docker compose example
docs
TensorFlow documentation
flann
Fast Library for Approximate Nearest Neighbors
gpu-bm3d
GPU-accelerated denoising with bm3d
jackyko1991
My personal repository.
jackyko1991.github.io
Source code for my personal development blog
microscope
Python library for control of microscope devices, supporting hardware triggers and distribution of devices over the network for performance and flexibility.
pcl
Point Cloud Library (PCL)
PINN
Keras examples of physics informed neural networks
plant-seg
A tool for cell instance aware segmentation in densely packed 3D volumetric images
pyclesperanto_prototype
GPU-accelerated bio-image analysis focusing on 3D+t microscopy image data
pyimagej-TrackMate
Python integration of TrackMate plugin in Fiji
siFRC
Python implementation of the Fourier Ring Correlation (FRC) to determine image resolution
tracking_evaluation
Reimplementation of TRA measure
Ultrack-Cluster
BMRC cluster run test script from Ultrack
voxelmorph
Unsupervised Learning for Image Registration