Itay Hadas's repositories
pytorch-tutorial
PyTorch Tutorial for Deep Learning Researchers
Tutorial_neural_time_series_analysis
Mike X Cohen lecturelets on Analyzing Neural Time Series Data: Theory and Practice http://mikexcohen.com/lectures.html
AARATEPPipeline
Advanced artifact removal for automated TMS-EEG processing
bids-matlab-tools-testcase
And example for bids-matlab-tools project
CL-phase
Real-time Closed-loop phase-dependent EEG-TMS
dicm2nii_MATLAB
DICOM to NIfTI conversion, NIfTI tools
dpsleep
Deep Phenotyping of Sleep: Open source pipeline to analyze raw actigraphy data and extract sleep parameters.
eeg-infants-exponent
This repository provides analysis code to analyze longitudinal changes in aperiodic activity in infant EEG data.
MAGIC
Magnetic stimulator interface controller toolbox
phastimate
Zrenner phase estimation
TAP
Custom MATLAB code to determine an optimal scalp placement of a TMS coil on the computational model of the subject's head. (1) Optimal coil placement is chosen based on maximizing the TMS-induced electric field in a brain region of interest which is derived from individual fMRI peak activity and computed prospectively for neuronavigation-supported TMS experiments. (2) The code's functionality allows also for accuracy assessment of the coil placement recorded during and analyzed after a TMS session.
lcmm
R package lcmm
PPI_desideri2019
phase preservation index (PPI) analysis
Targeted-Functional-Network-Stimulation
Code for implementing the Targeted Functional Network Stimulation (TANS) approach described in "Automated optimization of TMS coil placement for personalized functional network engagement", Lynch et al. 2022 (Neuron).
tms_targeting_Balderston
Scripts and matlab files to identify an optimal TMS target using fMRI data and e-field modelling.