Error when running pip install git+https://github.com/inspirehep/magpie.git@v2.0
jafetmorales opened this issue · comments
This is the output when running pip install git+https://github.com/inspirehep/magpie.git@v2.0
Collecting git+https://github.com/inspirehep/magpie.git@v2.0
Cloning https://github.com/inspirehep/magpie.git (to revision v2.0) to c:\users\jmorales\appdata\local\temp\pip-req-build-idioim4l
Requirement already satisfied: nltk~=3.2 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from magpie==2.0) (3.2.5)
Requirement already satisfied: numpy~=1.12 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from magpie==2.0) (1.15.0)
Collecting scipy~=0.18 (from magpie==2.0)
Downloading https://files.pythonhosted.org/packages/52/67/d9ef9b5058d4a9e3f0ae641ec151790622cbeb37f157de5773358e2bf3da/scipy-0.19.1.tar.gz (14.1MB)
Collecting gensim~=0.13 (from magpie==2.0)
Downloading https://files.pythonhosted.org/packages/81/ac/0210f508e3c04aea20c1bd2c9b8d9c3ddd5102984db8000078ccf229bba9/gensim-0.13.4.1-cp35-cp35m-win_amd64.whl (4.7MB)
Requirement already satisfied: scikit-learn~=0.18 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from magpie==2.0) (0.19.1)
Requirement already satisfied: keras~=2.0 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from magpie==2.0) (2.2.0)
Requirement already satisfied: h5py~=2.6 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from magpie==2.0) (2.8.0)
Requirement already satisfied: six in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from nltk~=3.2->magpie==2.0) (1.11.0)
Requirement already satisfied: smart-open>=1.2.1 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from gensim~=0.13->magpie==2.0) (1.6.0)
Requirement already satisfied: pyyaml in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from keras~=2.0->magpie==2.0) (3.12)
Requirement already satisfied: keras-preprocessing==1.0.1 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from keras~=2.0->magpie==2.0) (1.0.1)
Requirement already satisfied: keras-applications==1.0.2 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from keras~=2.0->magpie==2.0) (1.0.2)
Requirement already satisfied: boto3 in c:\users\jmorales\appdata\roaming\python\python35\site-packages (from smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (1.7.66)
Requirement already satisfied: boto>=2.32 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (2.48.0)
Requirement already satisfied: bz2file in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (0.98)
Requirement already satisfied: requests in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (2.19.1)
Requirement already satisfied: botocore<1.11.0,>=1.10.66 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from boto3->smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (1.10.73)
Requirement already satisfied: s3transfer<0.2.0,>=0.1.10 in c:\users\jmorales\appdata\roaming\python\python35\site-packages (from boto3->smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (0.1.13)
Requirement already satisfied: jmespath<1.0.0,>=0.7.1 in c:\users\jmorales\appdata\roaming\python\python35\site-packages (from boto3->smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (0.9.3)
Requirement already satisfied: certifi>=2017.4.17 in c:\users\jmorales\appdata\roaming\python\python35\site-packages (from requests->smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (2018.4.16)
Requirement already satisfied: urllib3<1.24,>=1.21.1 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from requests->smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (1.23)
Requirement already satisfied: chardet<3.1.0,>=3.0.2 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from requests->smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (3.0.4)
Requirement already satisfied: idna<2.8,>=2.5 in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from requests->smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (2.7)
Requirement already satisfied: python-dateutil<3.0.0,>=2.1; python_version >= "2.7" in c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages (from botocore<1.11.0,>=1.10.66->boto3->smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (2.7.3)
Requirement already satisfied: docutils>=0.10 in c:\users\jmorales\appdata\roaming\python\python35\site-packages (from botocore<1.11.0,>=1.10.66->boto3->smart-open>=1.2.1->gensim~=0.13->magpie==2.0) (0.14)
Building wheels for collected packages: magpie, scipy
Running setup.py bdist_wheel for magpie: started
Running setup.py bdist_wheel for magpie: finished with status done
Stored in directory: C:\Users\jmorales\AppData\Local\Temp\pip-ephem-wheel-cache-j2e6p0a5\wheels\73\af\43\c06434b3c17071b262b249ea4c346723e0e772e2adae480f25
Running setup.py bdist_wheel for scipy: started
Running setup.py bdist_wheel for scipy: finished with status error
Complete output from command c:\users\jmorales\appdata\local\programs\python\python35\python.exe -u -c "import setuptools, tokenize;__file__=C:\\Users\\jmorales\\AppData\\Local\\Temp\\pip-install-uitey289\\scipy\\setup.py;f=getattr(tokenize, open, open)(__file__);code=f.read().replace(\r\n, \n);f.close();exec(compile(code, __file__, exec))" bdist_wheel -d C:\Users\jmorales\AppData\Local\Temp\pip-wheel-o8c060zz --python-tag cp35:
lapack_opt_info:
lapack_mkl_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries mkl_rt not found in [c:\\users\\jmorales\\appdata\\local\\programs\\python\\python35\\lib, C:\\, c:\\users\\jmorales\\appdata\\local\\programs\\python\\python35\\libs]
NOT AVAILABLE
openblas_lapack_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\system_info.py:707: UserWarning: Specified path c:\opt\64\lib is invalid.
return self.get_paths(self.section, key)
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries libopenblas_v0.2.20_mingwpy not found in []
get_default_fcompiler: matching types: [gnu, intelv, absoft, compaqv, intelev, gnu95, g95, intelvem, intelem, flang]
customize GnuFCompiler
Could not locate executable g77
Could not locate executable f77
customize IntelVisualFCompiler
Could not locate executable ifort
Could not locate executable ifl
customize AbsoftFCompiler
Could not locate executable f90
customize CompaqVisualFCompiler
Found executable C:\Program Files (x86)\Gow\bin\DF.exe
customize IntelItaniumVisualFCompiler
Could not locate executable efl
customize Gnu95FCompiler
Could not locate executable gfortran
Could not locate executable f95
customize G95FCompiler
Could not locate executable g95
customize IntelEM64VisualFCompiler
customize IntelEM64TFCompiler
Could not locate executable efort
Could not locate executable efc
customize PGroupFlangCompiler
Could not locate executable flang
dont know how to compile Fortran code on platform nt
NOT AVAILABLE
openblas_clapack_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries libopenblas_v0.2.20_mingwpy not found in []
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries tatlas,tatlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries tatlas,tatlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries tatlas,tatlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
NOT AVAILABLE
atlas_3_10_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries satlas,satlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries satlas,satlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries satlas,satlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries ptf77blas,ptcblas,atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries ptf77blas,ptcblas,atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries ptf77blas,ptcblas,atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
NOT AVAILABLE
atlas_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries f77blas,cblas,atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries f77blas,cblas,atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries f77blas,cblas,atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
NOT AVAILABLE
c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\system_info.py:624: UserWarning:
Atlas (http://math-atlas.sourceforge.net/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [atlas]) or by setting
the ATLAS environment variable.
self.calc_info()
lapack_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack not found in [c:\\users\\jmorales\\appdata\\local\\programs\\python\\python35\\lib, C:\\, c:\\users\\jmorales\\appdata\\local\\programs\\python\\python35\\libs]
NOT AVAILABLE
c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\system_info.py:624: UserWarning:
Lapack (http://www.netlib.org/lapack/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [lapack]) or by setting
the LAPACK environment variable.
self.calc_info()
lapack_src_info:
NOT AVAILABLE
c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\system_info.py:624: UserWarning:
Lapack (http://www.netlib.org/lapack/) sources not found.
Directories to search for the sources can be specified in the
numpy/distutils/site.cfg file (section [lapack_src]) or by setting
the LAPACK_SRC environment variable.
self.calc_info()
NOT AVAILABLE
Running from scipy source directory.
non-existing path in scipy\\integrate: quadpack.h
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "C:\Users\jmorales\AppData\Local\Temp\pip-install-uitey289\scipy\setup.py", line 416, in <module>
setup_package()
File "C:\Users\jmorales\AppData\Local\Temp\pip-install-uitey289\scipy\setup.py", line 412, in setup_package
setup(**metadata)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\core.py", line 135, in setup
config = configuration()
File "C:\Users\jmorales\AppData\Local\Temp\pip-install-uitey289\scipy\setup.py", line 336, in configuration
config.add_subpackage(scipy)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 1024, in add_subpackage
caller_level = 2)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 993, in get_subpackage
caller_level = caller_level + 1)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 930, in _get_configuration_from_setup_py
config = setup_module.configuration(*args)
File "scipy\setup.py", line 15, in configuration
config.add_subpackage(linalg)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 1024, in add_subpackage
caller_level = 2)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 993, in get_subpackage
caller_level = caller_level + 1)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 930, in _get_configuration_from_setup_py
config = setup_module.configuration(*args)
File "scipy\linalg\setup.py", line 20, in configuration
raise NotFoundError(no lapack/blas resources found)
numpy.distutils.system_info.NotFoundError: no lapack/blas resources found
----------------------------------------
Failed building wheel for scipy
Running setup.py clean for scipy
Complete output from command c:\users\jmorales\appdata\local\programs\python\python35\python.exe -u -c "import setuptools, tokenize;__file__=C:\\Users\\jmorales\\AppData\\Local\\Temp\\pip-install-uitey289\\scipy\\setup.py;f=getattr(tokenize, open, open)(__file__);code=f.read().replace(\r\n, \n);f.close();exec(compile(code, __file__, exec))" clean --all:
`setup.py clean` is not supported, use one of the following instead:
- `git clean -xdf` (cleans all files)
- `git clean -Xdf` (cleans all versioned files, doesnt touch
files that arent checked into the git repo)
Add `--force` to your command to use it anyway if you must (unsupported).
----------------------------------------
Failed cleaning build dir for scipy
Successfully built magpie
Failed to build scipy
scikit-surprise 1.0.6 has requirement scipy>=1.0.0, but youll have scipy 0.19.1 which is incompatible.
Installing collected packages: scipy, gensim, magpie
Found existing installation: scipy 1.0.0
Uninstalling scipy-1.0.0:
Successfully uninstalled scipy-1.0.0
Running setup.py install for scipy: started
Running setup.py install for scipy: finished with status error
Complete output from command c:\users\jmorales\appdata\local\programs\python\python35\python.exe -u -c "import setuptools, tokenize;__file__=C:\\Users\\jmorales\\AppData\\Local\\Temp\\pip-install-uitey289\\scipy\\setup.py;f=getattr(tokenize, open, open)(__file__);code=f.read().replace(\r\n, \n);f.close();exec(compile(code, __file__, exec))" install --record C:\Users\jmorales\AppData\Local\Temp\pip-record-h5wbrazk\install-record.txt --single-version-externally-managed --compile:
Note: if you need reliable uninstall behavior, then install
with pip instead of using `setup.py install`:
- `pip install .` (from a git repo or downloaded source
release)
- `pip install scipy` (last SciPy release on PyPI)
lapack_opt_info:
lapack_mkl_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries mkl_rt not found in [c:\\users\\jmorales\\appdata\\local\\programs\\python\\python35\\lib, C:\\, c:\\users\\jmorales\\appdata\\local\\programs\\python\\python35\\libs]
NOT AVAILABLE
openblas_lapack_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\system_info.py:707: UserWarning: Specified path c:\opt\64\lib is invalid.
return self.get_paths(self.section, key)
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries libopenblas_v0.2.20_mingwpy not found in []
get_default_fcompiler: matching types: [gnu, intelv, absoft, compaqv, intelev, gnu95, g95, intelvem, intelem, flang]
customize GnuFCompiler
Could not locate executable g77
Could not locate executable f77
customize IntelVisualFCompiler
Could not locate executable ifort
Could not locate executable ifl
customize AbsoftFCompiler
Could not locate executable f90
customize CompaqVisualFCompiler
Found executable C:\Program Files (x86)\Gow\bin\DF.exe
customize IntelItaniumVisualFCompiler
Could not locate executable efl
customize Gnu95FCompiler
Could not locate executable gfortran
Could not locate executable f95
customize G95FCompiler
Could not locate executable g95
customize IntelEM64VisualFCompiler
customize IntelEM64TFCompiler
Could not locate executable efort
Could not locate executable efc
customize PGroupFlangCompiler
Could not locate executable flang
dont know how to compile Fortran code on platform nt
NOT AVAILABLE
openblas_clapack_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries libopenblas_v0.2.20_mingwpy not found in []
NOT AVAILABLE
atlas_3_10_threads_info:
Setting PTATLAS=ATLAS
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries tatlas,tatlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries tatlas,tatlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries tatlas,tatlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
NOT AVAILABLE
atlas_3_10_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries satlas,satlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries satlas,satlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries satlas,satlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
NOT AVAILABLE
atlas_threads_info:
Setting PTATLAS=ATLAS
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries ptf77blas,ptcblas,atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries ptf77blas,ptcblas,atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries ptf77blas,ptcblas,atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
NOT AVAILABLE
atlas_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries f77blas,cblas,atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\lib
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries f77blas,cblas,atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in C:\
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries f77blas,cblas,atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack_atlas not found in c:\users\jmorales\appdata\local\programs\python\python35\libs
NOT AVAILABLE
c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\system_info.py:624: UserWarning:
Atlas (http://math-atlas.sourceforge.net/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [atlas]) or by setting
the ATLAS environment variable.
self.calc_info()
lapack_info:
No module named numpy.distutils._msvccompiler in numpy.distutils; trying from distutils
customize MSVCCompiler
libraries lapack not found in [c:\\users\\jmorales\\appdata\\local\\programs\\python\\python35\\lib, C:\\, c:\\users\\jmorales\\appdata\\local\\programs\\python\\python35\\libs]
NOT AVAILABLE
c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\system_info.py:624: UserWarning:
Lapack (http://www.netlib.org/lapack/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [lapack]) or by setting
the LAPACK environment variable.
self.calc_info()
lapack_src_info:
NOT AVAILABLE
c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\system_info.py:624: UserWarning:
Lapack (http://www.netlib.org/lapack/) sources not found.
Directories to search for the sources can be specified in the
numpy/distutils/site.cfg file (section [lapack_src]) or by setting
the LAPACK_SRC environment variable.
self.calc_info()
NOT AVAILABLE
Running from scipy source directory.
non-existing path in scipy\\integrate: quadpack.h
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "C:\Users\jmorales\AppData\Local\Temp\pip-install-uitey289\scipy\setup.py", line 416, in <module>
setup_package()
File "C:\Users\jmorales\AppData\Local\Temp\pip-install-uitey289\scipy\setup.py", line 412, in setup_package
setup(**metadata)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\core.py", line 135, in setup
config = configuration()
File "C:\Users\jmorales\AppData\Local\Temp\pip-install-uitey289\scipy\setup.py", line 336, in configuration
config.add_subpackage(scipy)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 1024, in add_subpackage
caller_level = 2)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 993, in get_subpackage
caller_level = caller_level + 1)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 930, in _get_configuration_from_setup_py
config = setup_module.configuration(*args)
File "scipy\setup.py", line 15, in configuration
config.add_subpackage(linalg)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 1024, in add_subpackage
caller_level = 2)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 993, in get_subpackage
caller_level = caller_level + 1)
File "c:\users\jmorales\appdata\local\programs\python\python35\lib\site-packages\numpy\distutils\misc_util.py", line 930, in _get_configuration_from_setup_py
config = setup_module.configuration(*args)
File "scipy\linalg\setup.py", line 20, in configuration
raise NotFoundError(no lapack/blas resources found)
numpy.distutils.system_info.NotFoundError: no lapack/blas resources found
----------------------------------------
Rolling back uninstall of scipy
Command "c:\users\jmorales\appdata\local\programs\python\python35\python.exe -u -c "import setuptools, tokenize;__file__=C:\\Users\\jmorales\\AppData\\Local\\Temp\\pip-install-uitey289\\scipy\\setup.py;f=getattr(tokenize, open, open)(__file__);code=f.read().replace(\r\n, \n);f.close();exec(compile(code, __file__, exec))" install --record C:\Users\jmorales\AppData\Local\Temp\pip-record-h5wbrazk\install-record.txt --single-version-externally-managed --compile" failed with error code 1 in C:\Users\jmorales\AppData\Local\Temp\pip-install-uitey289\scipy\
This is my setup:
Python version: 3.5
OS: Windows 10 Home
System Type: 64-bit Operating System, x64-based processor
Processor: AMD A10-8700P Radeon R6
Magpie installation fails because scipy dependency installation fails. For Window systems, scipy~=0.18 may need to be installed by hand, since I could not find any Windows wheels for scipy<1.0.0.