igg-bioinfo / mappingToFHIR

This repository allows to perform a mapping of clinical data extracted from EMRs of cancer patients in FHIR

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mappingToFHIR

This repository allows to perform a mapping of clinical data extracted from EMRs of cancer patients in FHIR (https://www.hl7.org/fhir/).

In the main.py file you can set the flags for the automatic generation of the Patient and Condition FHIR-compliant resources starting from the data extracted from the medical record. The latter can come directly from the database server or from a .csv file exported from it.

The generated .json files are finally sent to the server which converts them into FHIR resources.

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This repository allows to perform a mapping of clinical data extracted from EMRs of cancer patients in FHIR

License:MIT License


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