Add module for variancePartition
vjmarteau opened this issue · comments
How does that relate to RUVSeq/SVA (#18)?
If you add "batch" as factor you can nicely see how much variance is accounted for by batch effects. So far I have not only used the variancePartition package to check if batch effects have been removed after normalization (as suggested in #18), but also looked at the amount of variation that is explained by biological factors.