icbi-lab / infercnvpy

Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.

https://infercnvpy.readthedocs.io/en/latest/

What are the units of 'window_size'?

rgranit opened this issue 3 years ago · comments

Roy Granit, PhD commented 3 years ago

Does it represent the gene number or MB?

Gregor Sturm commented 3 years ago

Number of genes

Roy Granit, PhD commented 3 years ago

Thanks!