Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
Home Page:https://infercnvpy.readthedocs.io/en/latest/
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chsher opened this issue 3 years ago · comments
I am trying to run the infercnv function on an anndata object and am receiving an error message: "provided out is the wrong size for the reduction" --
Looks like it is fixed by converting obs_col to numpy array with obs_col.values.