HMM-based CNV caller
grst opened this issue · comments
Gregor Sturm commented
inferCNV uses a hidden markov model to turn the smoothed gene expression into genomic regions that are subject to CNV.
Would be nice to implement a similar feature here.
Infer copy number variation (CNV) from scRNA-seq data. Plays nicely with Scanpy.
grst opened this issue · comments
inferCNV uses a hidden markov model to turn the smoothed gene expression into genomic regions that are subject to CNV.
Would be nice to implement a similar feature here.