Johnny Li's repositories

keggx

Manipulate KEGG networks as NetworkX objects in in Python

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AnswerALS_QTL

eQTL and caQTL analyses for AnswerALS data

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GSD

Graph-Sparse Decomposition

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kegg-kgml-parser--python-

create a networkx.DiGraph object from a KEGG pathway file, with python

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MIT_talks

A way to consolidate MIT talks and seminar listings

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pyranges

Performant Pythonic GenomicRanges

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rambutan

Prediction of the 3D structure of the genome through statistically significant Hi-C contacts.

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rasqual

Robust Allele Specific Quantification and quality controL

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tensorqtl

Ultrafast GPU-based QTL mapper

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TOBIAS

Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal

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