htt1994

VesselSeg-1

DenseNet Parallel Branch Retina (DenseNetPBR) for concurrent segmentation and classification experiments.

DeepCAC

Fully automatic coronary calcium risk assessment using Deep Learning.

VesselSegmentation

Medical-Data-Visualization-3D

This is a medical data visualization program. This takes in some medical DICOM, MRI, CT data and produces 3D model. There are also other tools included such as image scroller, image segmentation, brain 3d model, bone 3d model visualizer.

Medical-Image-Processing

Code for Matlab and ITK, segmentation of the liver using the graph cut theory and 3D rendering of abdomen and liver

pytorch-cnn-visualizations

Pytorch implementation of convolutional neural network visualization techniques

recurrent-unet-drive

1sadassf

3D_Unet_Vessel_segmentation

Part of research code

awesome-gan-for-medical-imaging

Awesome GAN for Medical Imaging

creaCoroDeteccion

Curved-Projection-Reformation-CPR-

Curved Projection Reformation

CVPR2019-Code

CVPR 2019 Paper with Code

ITK-BWA-RF_segmentationinterpolation

Fast manual segmentation of 3D datasets using contour and intensity guided interpolation

ITKThickness3D

An ITK module to compute 3D thickness

machine-learning-deep-learning-notes

机器学习、深度学习的学习路径及知识总结

MLAlgorithms

Minimal and clean examples of machine learning algorithms implementations

PlotNeuralNet

Latex code for making neural networks diagrams

pytools-lib

A general library of python tools

pytorch-handbook

pytorch handbook是一本开源的书籍，目标是帮助那些希望和使用PyTorch进行深度学习开发和研究的朋友快速入门，其中包含的Pytorch教程全部通过测试保证可以成功运行

pytorch-receptive-field

Compute CNN receptive field size in pytorch in one line

Segmentation_Interface

Simple interface of medical imaging processing

simple-centerline-extraction

simple-centerline-extraction

skeleton-GT-DRIVE-GUFI-dataset

Ground-truths manually created for DRIVE and GUFI datasets

surface-distance

Library to compute surface distance based performance metrics for segmentation tasks.

transferlearning

Everything about Transfer Learning and Domain Adaptation--迁移学习

TubeTK-tre2matrix

将TubeTK平台提供的血管标注文件（.tre）转换为三维体素格式

UNet-Hub

UNet Hub

Vessel-Segmentation-MR-Registration

The code in this repository is from my master thesis. This project aims to automatically segment carotid from 3D MR brain image, and use the segmented carotid to extract Time-Activity-Curve from PET images. It mainly involves 3D image coregistration, vessel segmentation, partial valume correction.

Vessel_Surface_Reconstruction-C

Blood vessel surface reconstruction from vessel center skeleton using VTK