Allen's starred repositories
StableDiffusionReconstruction
Takagi and Nishimoto, CVPR 2023
Diffusion-Models-pytorch
Pytorch implementation of Diffusion Models (https://arxiv.org/pdf/2006.11239.pdf)
benchmark_VAE
Unifying Variational Autoencoder (VAE) implementations in Pytorch (NeurIPS 2022)
explainerdashboard
Quickly build Explainable AI dashboards that show the inner workings of so-called "blackbox" machine learning models.
Imaging-transcriptomics
A package, and script, to perform imaging transcriptomics on a neuroimaging scan.
segmentation_models.pytorch
Semantic segmentation models with 500+ pretrained convolutional and transformer-based backbones.
stable-diffusion-webui
Stable Diffusion web UI
stable-diffusion
A latent text-to-image diffusion model
GNNs-in-Network-Neuroscience
A review of papers proposing novel GNN methods with application to brain connectivity published in 2017-2020.
DeepPurpose
A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)
awesome-contrastive-self-supervised-learning
A comprehensive list of awesome contrastive self-supervised learning papers.
pylustrator
Visualisations of data are at the core of every publication of scientific research results. They have to be as clear as possible to facilitate the communication of research. As data can have different formats and shapes, the visualisations often have to be adapted to reflect the data as well as possible. We developed Pylustrator, an interface to directly edit python generated matplotlib graphs to finalize them for publication. Therefore, subplots can be resized and dragged around by the mouse, text and annotations can be added. The changes can be saved to the initial plot file as python code.
Contrastive-Predictive-Coding-PyTorch
Contrastive Predictive Coding for Automatic Speaker Verification
IJCAI2023-CoNR
IJCAI2023 - Collaborative Neural Rendering using Anime Character Sheets
awesome-self-supervised-learning
A curated list of awesome self-supervised methods
scikit-learn
scikit-learn: machine learning in Python
RadiomicsFeatureVisualization
Visualization for radiomics feature generated by pyradiomics