Bin Z. He's repositories
He-et-al-2017-eLife
code to reproduce Figure 3, 4 and 5 in the paper
2007-08_TFBS
My first Ph.D. project, as an example of how NOT to organize your computational analysis folder
2017-Zhang-Yong-GenTree
collaboration with Yong on the GenTree project
2018-Fall-Bioinformatics
Bioinformatics course for U of Iowa Undergraduates (BIOL:4213)
2019-Bioinfo
course repo for 2019 Bioinformatics (BIOL:4213)
2020-Data-Skills
2020 BIOL:4386 Introduction to Scientific Computing
2020-mol-evol
course website for molecular evolution
2021-Bioinfo
BIOL:4213 Bioinformatics course repository, University of Iowa, Department of Biology
2021-Data-Skills
BIOL:4386 2021 Spring
2022-summer-coding-workshop
GRE lab summer coding workshop
2023-summer-coding-workshop
2023 Summer Coding Workshop on clustering
A014-sensu-stricto-divergence
estimate the divergence time between sensu stricto species
BIOL-4213-Bioinformatics
Course website for BIOL:4213 Bioinformatics at University of Iowa
coursera-eda-projects
Projects for peer-review, part of Coursera's EDA course (https://www.coursera.org/learn/exploratory-data-analysis)
IntroSciComp
Course site for Introduction to Scientific Computing for Biologists
more-pho
research documents for the PHO evolution project, which extends from the 2017 eLife publication
PHO5_evolve
This is a collaborative project with Dennis Wykoff group at Villinova U
PTC_evolution
Collaboration with Yong
Ubuntu
setup for some of my favorite applications
vitae
my cv, pulling data from tables and bib files; made in RMD thanks to https://github.com/mitchelloharawild/vitae and https://github.com/StefanoAllesina/cv