hannahbos / disinhibitory_pathways

scripts for simulation, analysis, and figures for the manuscript 'Untangling stability and gain modulation in cortical circuits with multiple interneuron classes'

scripts for simulation, analysis, and figures for the manuscript 'Untangling stability and gain modulation in cortical circuits with multiple interneuron classes'

Dependencies:

• NEST 2.16.0
• h5py_wrapper available on https://github.com/INM-6/h5py_wrapper

Files for figures:

• create_figures.py: creates all figures
• create_figures_helpers.py: helper functions for figure creation, starts NEST simulation
• helpers.py, network.py, network_params.py, stimulus_params.py: NEST files
• read_sim.py: functions that read data created by NEST
• meanfield/*: scripts for meanfield analysis. They build on an earlier version of the neural network meanfield toolbox (https://github.com/INM-6/neural_network_meanfield) which only allowed one synaptic time constant.
• data/ empty direction, simulation data will be saved here