Beast code in Giters

Gianvito Urgese's repositories

bioconda-recipes

Conda recipes for the bioconda channel.

Language:Shell000

caffe

Caffe for Structurally Sparse Deep Neural Networks

Language:C++NOASSERTION020

centroid-rna-package

Centroid RNA package

Language:C++GPL-2.0000

cereal

A C++11 library for serialization

Language:C++NOASSERTION000

connectiq-app-rawlogger

RawLogger (Garmin ConnectIQ) App [GPLv3]

Language:JavaNOASSERTION000

deep-review

A collaboratively written review paper on deep learning, genomics, and precision medicine

Language:PythonNOASSERTION000

foldatlas

A repository for genome-scale RNA structure probing data

Language:CSSNOASSERTION000

grill-eprop-lsnn

Telluride projects around e-prop and other LSNN algorithms

Language:Jupyter NotebookMIT010

ipknot

Integer programming based prediction of RNA secondary structures with pseudoknots

Language:C++GPL-3.0020

lara

LaRA 2: Lagrangian Relaxed structural Alignment

Language:C++NOASSERTION000

laragu

The new version of Lara tool for the structural-alignment of RNA sequences

Language:C++000

lava

A Software Framework for Neuromorphic Computing

NOASSERTION000

lava-dl

Deep Learning library for Lava

BSD-3-Clause000

lava-optimization

Constraint Optimization with Lava

BSD-3-Clause000

mockcommunity

Long-read mock community experiments

Language:HTML000

ncov

Nextstrain build for novel coronavirus SARS-CoV-2

Language:PythonMIT010

nengo_assignments

Assignment questions for Nengo tutorial

GPL-3.0000

pynn_spinnaker

Rig backend for PyNN 0.8

Language:Python000

python-scripts

because i'm tired of gists

Language:Python000

python-scripts-1

Short and fun Python scripts.

Language:PythonMIT000

scholar.py

A parser for Google Scholar, written in Python

Language:Python000

Scripts

My scripts - primarily using python and appscript

Language:Python020

sdsl-lite

Succinct Data Structure Library 2.0

Language:C++NOASSERTION000

seqan

SeqAn's official repository.

Language:C++NOASSERTION000

seqan3

The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.

Language:C++NOASSERTION020

smrnaseq

A small-RNA sequencing analysis pipeline

MIT000

SquiggleKit

SquiggleKit: A toolkit for manipulating nanopore signal data

Language:PythonMIT000

zynqnet

Master Thesis "ZynqNet: An FPGA-Accelerated Embedded Convolutional Neural Network"

Language:HTMLGPL-3.0000