gurayerus

NiChart_Project

Neuro Imaging Chart of AI-based Imaging Biomarkers

Papers

AIBIL_Workflows

A collection of Snakemake workflows for AIBIL image processing and analysis workflows

NiChart_Workflows

NiChart_Engine

spare_score

Compute SPARE scores to detect characteristic feature patterns

NiChart_Centiles

Scripts for creation of centiles from sample data

NiChart_Study_ClinData_PRIVATE

Scripts for consolidation of clinical data for each study

NiChart_InitialData_PRIVATE

Initial data colllection for NiChart

NiChart_MRISnapshot

A QC tool for verification of datasets with MRI images and derived masks

NiChart_Website

The Landing page for the NiChart project

niCHARTPipelines

nichart-dash-prototype

NiPlot

DLICV

A Deep Learning segmentation model specifically customized and trained for segmenting intra-cranial volume (ICV) from T1-weighted MRI scans

NiChart

A GUI tool for visualization and analysis of quantitative neuroimaging data. The tool provides users multiple plugins to view/plot multiple datasets, filter and merge them, and apply pre-trained models on the datasets to derive new variables.

NiBAx

A fork of NiBAx to propose a remake of few components of it

DeepMRSeg-Models

DeepMRSeg

MRIReport

tmp-deepmrseg-models

deepmrseg models saved as tmp

MLSeminarSandbox