Michael Chambers's repositories
abricate_genomes
use Abricate to find some fun bits in a slew of genomes
alignparse
Align sequences and then parse features.
cookiecutter-data-science
A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.
dms_human-pkr_vacv-k3
Systematic characterization of the local evolutionary space available to human PKR and vaccinia virus K3
dms_human_pkr
Deep mutational scan of Human PKR under pseudosubstrate antagonism by vaccinia K3
docker-humann2
Docker image running HUMANN2
excited-state
Minimal is a Jekyll theme for GitHub Pages
greenkidneybean.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
Illustrate
Biomolecular Illustration Tool
IscB
AlphaFold structure prediction for IscB
ngs-test-data
A workflow for creating small NGS test data sets, useful for continuous integration.
pbio504
PBIO-504 Biostatistics Course
Repro_git_vcs_tutorial
A simple tutorial on Git and Github, geared at scientists and reproducible research applications.
SARS-CoV-2-RBD_DMS
Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike
spring2019-group-project-team_plant
spring2019-group-project-team_plant created by GitHub Classroom
thesis
Supplementary data, code, and tables
yeast_synthetic_agglutination
Sequence analysis code for characterizing protein-protein interactions with YSA