gicmo / CaManager

Calcium-Imaging tool suite for ImageJ/Fiji

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Ca²⁺ Manager

The Ca²⁺ Manager is an Image J plugin to generate kymographs for the analysis of calcium imaging recordings in single neurons. With this plugin, you can trace a region of interest for a given neuron across repetitions of different conditions. The data associated with the region of interest can be exported together with simple metadata information, e.g. the animal age, in a NIX file. The latter can be viewed with the NixView program. Further processing of the data, e.g. averages of specific kymographs, can be done with the CaAnalysis scripts.

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Calcium-Imaging tool suite for ImageJ/Fiji

License:BSD 3-Clause "New" or "Revised" License


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Language:Java 99.2%Language:Batchfile 0.5%Language:Shell 0.3%