error while loading shared libraries: libhts.so.2
kpatankar opened this issue · comments
Hi,
I installed pindel. When I run the ./pindel
command it gives me following error.
./pindel: error while loading shared libraries: libhts.so.2: cannot open shared object file: No such file or directory
To resolve this I performed following steps:
find ~ -name libhts.so.2
It gave me the following path
/home/kalyani/bin/htslib-1.9/libhts.so.2
export LD_LIBRARY_PATH=/home/kalyani/htslib-1.6/libhts.so.2
It still gives me the error regarding the htslib.so.2 not found.
Are there some steps which I am missing?
Appreciate your response.
Thanks!!!
Hi,
The issue was resolved by command:
export LD_LIBRARY_PATH=/home/kalyani/htslib-1.6/
./pindel
running successfully.
I had a similar problem with the program gencore:
./gencore
./gencore: error while loading shared libraries: libhts.so.2to3part5: cannot open shared object file: No such file or directory
Thanks for you command. It resolved the problem.
hi, luistatlav. I have the same problem with yours. How did you solve it since it's libhts.so.2to3part5 missing not the libhts.so? Thanks!!
hi, luistatlav. I have the same problem with yours. How did you solve it since it's libhts.so.2to3part5 missing not the libhts.so? Thanks!!
Hi @Yuxinagli, I had the problem on subsystem of linux for Windows. I did the same that @kpatankar:
The issue was resolved by command:
export LD_LIBRARY_PATH=/home/NameOfUser/htslib-1.6/
and ./gencore
running successfully.
hi, luistatlav. I have the same problem with yours. How did you solve it since it's libhts.so.2to3part5 missing not the libhts.so? Thanks!!
Hi @Yuxinagli, I had the problem on subsystem of linux for Windows. I did the same that @kpatankar:
The issue was resolved by command:
export LD_LIBRARY_PATH=/home/NameOfUser/htslib-1.6/
and
./gencore
running successfully.
Thanks, @luistatlav ! It works with this modification in the ~/.bashrc .