general0710's repositories
Sadick_et_al._2022
Human astrocytes and oligodendrocytes to the max!
sci_scRNAseq
Code for analysis and results published in https://doi.org/10.1084/jem.20210040
scRNA-AHCA
Single-cell transcriptome profiling of an adult human cell atlas of 15 major organs
FluentTerminal
A Terminal Emulator based on UWP and web technologies.
excelerate-scRNAseq
Single RNA-seq data analysis with R (Finland, May, 2019)
drawio
Source to www.draw.io
picard
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
seqkit
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang
csvkit
A suite of utilities for converting to and working with CSV, the king of tabular file formats.
gtex-pipeline
GTEx & TOPMed data production and analysis pipelines
awesome-single-cell
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
AiLearning
AiLearning: 机器学习 - MachineLearning - ML、深度学习 - DeepLearning - DL、自然语言处理 NLP
MFs_peripheralCentralNerveSystem
Scripts of Ydens et al. Nature Neuroscience. 2020
scRNA.seq.course
Analysis of single cell RNA-seq data course
cortical_astrocyte_mapping
Mapping locations of cortical single astrocyte RNA-seq
MIND
Using Multiple Measurements of Tissue to Estimate Subject- And Cell-Type-Specific Gene Expression via Deconvolution
rnaseq_tutorial
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
my-R
a small collection for my R scripts