gaoyi

SlicerBigImage

Large (GB and above) scale microscopic image computing using 3D Slicer

SlicerVirtualEndoscopy

kslice

interactive medical image processing

multiScaleShape

Multi-scale image/shape decomposition, reconstruction, and filtering (soft/hard thresholding) using 2D and 3D wavelet transformation with ITK images.

SegmentationAidedRegistration

Use the segmentation (binary map) to help registration of the corresponding grayscale images. This improves the registration accuracy in particular at the segmetnation target region.

SPoM

Statistical Shape Analysis using 3D Poisson Equation---A Quantitatively Validated Approach

FastGrowCut

This is a fast implementation of the GrowCut method which supports multi-label segmentation

meanShift

naive implementation of the mean-shift algorithm based on Insight Toolkit ITK

needleTracking

SlicerPoissonShapeAnalysis

Statistical Shape Analysis using 3D Poisson Equation---A Quantitatively Validated Approach

RobustStatisticsSegmenter

Editor extension for using the 'RobustStatSegmenter' CLI module.

AFibLongitudinalRegistration

gaoyi.github.io

Yi Gao's site on github

iGynePy

iGynePy source code

interactivemedical.github.io

Website to host the IMIC MICCAI Workshop website

label-reg

A tutorial of the re-factored label-driven registration code, based on "Weakly-supervised convolutional neural networks for multimodal image registration"

MORSS

Multi-Object Robust Statistics Segmenter

ProjectWeek

Website for NA-MIC Project Weeks

RSSExtension

interactive 3D image segmentation tool

VirtualPancreatoscopy

3D Slicer based virtual pancreatoscopy