fritzsedlazeck / SURVIVOR

Toolset for SV simulation, comparison and filtering

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simSV bed output explanation of DEL and INS position

charliechen912ilovbash opened this issue · comments

Hi,
I am using simsv and got the bed output.
But I am a little confused about the position in bed file, especially for DEL and INS.
For example,
chr1 10 100 DEL
I guess this coordinate is the input ref.fa of simsv ?

But for INS,
chr1 10 100 INS
Is this coordinate the simulated.fasta ?