Error with merging VCF files for trio SVs
racemore opened this issue · comments
Hello Fritz,
I attempted to merge 3 family v4.2 VCF files and the output, viewed using bcftools, is pictured below. I also attempted to merge a two VCFs of the same individual's VCF file as a sanity check, hoping all the data would remain the same, but again, the output only shows the metadata like below. Any suggestions would be greatly appreciated as I am new to using this tool!
Thank you,
Aracely Moreno
Survivor doesn't work on compressed VCf files. My guess is that your input files were compressed.
Cheers
Fritz
That worked. Thanks!