Beast code in Giters

Fedor Nikolaev's starred repositories

nablaDFT

nablaDFT: Large-Scale Conformational Energy and Hamiltonian Prediction benchmark and dataset

Language:PythonMIT15000

bio_embeddings

Get protein embeddings from protein sequences

Language:HTMLMIT44600

nvidia-htop

A tool for enriching the output of nvidia-smi.

Language:PythonBSD-3-Clause51600

biopython

Official git repository for Biopython (originally converted from CVS)

Language:PythonNOASSERTION423400

RITA

RITA is a family of autoregressive protein models, developed by LightOn in collaboration with the OATML group at Oxford and the Debora Marks Lab at Harvard.

Language:PythonMIT8800

Tranception

Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"

Language:PythonMIT12800

SEMAi

Spatial Epitope Modeling with Artificial intelligence (SEMA)

Language:Jupyter Notebook2900

bigbird

Transformers for Longer Sequences

Language:PythonApache-2.055800

mgpt

Multilingual Generative Pretrained Model

Language:Jupyter NotebookNOASSERTION19600

GENA_LM

GENA-LM is a transformer masked language model trained on human DNA sequence.

Language:Jupyter NotebookMIT15400

esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

Language:PythonMIT297700

YaLM-100B

Pretrained language model with 100B parameters

Language:PythonApache-2.0372900

quaterion

Blazing fast framework for fine-tuning similarity learning models

Language:PythonApache-2.062800

practical-mlops-book

[Book-2021] Practical MLOps O'Reilly Book

Language:Jupyter Notebook67700

qdrant

Qdrant - High-performance, massive-scale Vector Database for the next generation of AI. Also available in the cloud https://cloud.qdrant.io/

Language:RustApache-2.01879000

DoYouEvenLearn

Essential Guide to keep up with AI/ML/DL/CV

CC0-1.0102800

FAS

FAS - Tool for Feature Architecture Similarity calculation

Language:PythonGPL-3.0400

simpletransformers

Transformers for Information Retrieval, Text Classification, NER, QA, Language Modelling, Language Generation, T5, Multi-Modal, and Conversational AI

Language:PythonApache-2.0403500

vespa

AI + Data, online. https://vespa.ai

Language:JavaApache-2.0546500

phantomuserland

Phantom: Persistent Operating System

Language:CLGPL-3.088900

awesome-vector-search

Collections of vector search related libraries, service and research papers

MIT133200

DRKG

A knowledge graph and a set of tools for drug repurposing

Language:Jupyter NotebookApache-2.056500

qwerty-fr

Qwerty keyboard layout with French accents

Language:PerlMIT37200

elastiknn

Elasticsearch plugin for nearest neighbor search. Store vectors and run similarity search using exact and approximate algorithms.

Language:ScalaApache-2.035800

NearPy

Python framework for fast (approximated) nearest neighbour search in large, high-dimensional data sets using different locality-sensitive hashes.

Language:PythonMIT75900

ann-benchmarks

Benchmarks of approximate nearest neighbor libraries in Python

Language:PythonMIT473900

poincare_glove

Implementation of the "Poincare Glove: Hyperbolic word embeddings" paper

Language:Jupyter NotebookLGPL-2.18300

NodePiece

Compositional and Parameter-Efficient Representations for Large Knowledge Graphs (ICLR'22)

Language:PythonMIT13600

pysparnn

Approximate Nearest Neighbor Search for Sparse Data in Python!

Language:PythonNOASSERTION91600

BLINK

Entity Linker solution

Language:PythonMIT115100