fauziharoon's repositories

fauziharoon.github.io

My personal page

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anvio

An analysis and visualization platform for 'omics data

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annotateM

annotate my genome

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metapathways2

MetaPathways 2.0 - Python Beta Code

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APP

Ace Pyrotag Pipeline - wrapper for QIIME and R - interfaces with PyroDB

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bbbin

A collection of working and non-working bioinformatics scripts

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KO_counting

for counting and plotting KO groups of multiple organisms

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ionPairer

create a rough scaffold using ion torrent MP reads

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sam2fpkg

Convert a sam mapping file and gff3 annotation file to find transcriptomic level in microbial transciptomic data sets

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bioruby-hmmer3_report

Parser for hmmsearch and hmmscan in the HMMER 3 package.

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miscperlscripts

Small collection of random useful perl scripts

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templates

A set of GPL templates which make coding more funner!

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